Field Notes

<--2021-06-16 09:15:00 | 2021-06-24 08:50:00-->
Other sites visited today: Hill Slough | Bouldin Alfalfa | East End | West Pond | Mayberry | Sherman Wetland

Bouldin Corn: 2021-06-22 11:45:00 (DOY 173)
Author: Daphne Szutu
Others: Dennis, Ariane

Summary: Regular data collection/cleaning, windy, spectral, veg height, downloaded IRT data, fiddled with picam clocks

2021-06-22
Bouldin Corn

Dennis, Ariane, and I arrived at 11:45 PDT. It was a breezy and warm day with good visibility. The corn is about chin height.

Dennis took spectral and veg height measurements.

Ari cleaned flux and rad sensors. I downloaded met, camera, and USB GHG data. I downloaded the FD data and cleared its memory. I downloaded the PA data and power-cycled the sensor.

The dfPAR still has NANs, and I wonder if it’s because it’s sharing a control port with the 6 NDVI/PRI sensors (via a screw terminal). They all have different addresses, so it shouldn’t matter. But to see if it would make a difference, I moved the dfPAR from C7 to C5. C5 is also used by the water level sensor. I uploaded a new datalogger program with the new control port.

I downloaded the undercanopy cameras and cleared their memories. For Picam 1, I changed the clocks from 11:22 to 11:15 to match the laptop time. For Picam 2, I changed the clocks from 11:21 to 11:10 to match the laptop time.

Their clocks were off again by about 7-10 minutes even though we just re-set them last week. Joe suggested I check both the system time and the real-time clock (RTC) times. When I arrived, the system time and RTC were the same. After I set the system time using the “sudo date –s” command, the system time was correct but the RTC time was still bad, so I figured the RTC was setting the system time every once in a while (maybe on start-up?). I used the “sudo hwclock –w” command to set the RTC using the system time and confirmed the RTC and the system time matched. I restarted the picam and confirmed the RTC and system times still matched. I went through the same process for both cameras.

Summary of clock commands for the pi:
To check system time: date
To check RTC: sudo hwclock –r
Set system time: sudo date –s “Tue 22 Jun 14:15:00 -08 2021” (make sure text string matches format of the output from the “date” command)
Set RTC time from system time: sudo hwclock -w

I also downloaded the IRT files by moving them from the microSD card to the laptop. Next time I’ll use the LoggerNet utility CardConvert to convert them from binary to TOA5 format. I inserted the microSD card back into the IRT datalogger but I can’t remember if I waited for the Activity LED to blink.

LI-7500 readings:
CO2 392ppm
H2O 730ppm
T 24.5C
P 101.1kPa
SS 100-->102 after cleaning
LI7700 readings:
CH4 1.92
RSSI 60-->74 after cleaning

We left at 12:30 PDT.

Veg Height (cm): Tape measure from ground to top of plant
122, 141, 150, 150, 120, 130, 128, 135, 162, 152, 157, 183, 157, 163, 171, 145, 169, 133, 163, 148, avg = 149, stdev = 17.24

0 photos found

Graphs display:
6 sets found

17 BC_met graphs found

Explore the graph:Battery Voltage in a new window

Explore the graph:Soil Heat Flux in a new window

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Explore the graph:Air Pressure and RH in a new window

Explore the graph:Soil Moisture in a new window

Explore the graph:Bouldin Corn PAR in a new window

Explore the graph:NDVI channels in a new window

Explore the graph:PRI Channels in a new window

Explore the graph:Soil Temperatures Set A in a new window

Explore the graph:Soil Temperatures Set B in a new window

Explore the graph:Soil Temperatures Set C in a new window

Explore the graph:SRS NDVI and PRI in a new window

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Explore the graph:Forced Diffusion Soil CO2 Flux in a new window

Explore the graph:Surface Temperature in a new window

5 BC_flux graphs found

Explore the graph:LI-7500 CO2 and H2O in a new window

Explore the graph:7700 CH4 and RSSI in a new window

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Can't check TATWBABCSB_cam
Can't check MBSWEEWPBCBA
2 BC_pa graphs found

Explore the graph:Purple Air Met Data in a new window

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1 BC_arable graphs found

Explore the graph:Temperatures in a new window