Field Notes

<--2021-06-22 10:20:00 | 2021-07-08 08:00:00-->

Hill Slough: 2021-07-07 09:00:00 (DOY 188)
Author: Ariane Arias-Ortiz
Others: Daphne, Carlos

Summary: Regular data collection/cleaning, soil cores (day 1)

Daphne, Carlos and I arrived at Hill Slough at around 9:00 am PDT. It was mild and windy with good visibility, and we could see the fog over the hills to our west. We drove all the way to the tower to unload the truck with all the coring material. We brought an aluminum ladder from the lab to help get on/off the boardwalk and we'll leave it in the locked enclosure next to the scaffolding.

Daphne collected data from the tower and cleaned rad and flux sensors. Some of the 4-way channels had gaps and spikes; the wiring looked ok so she unplugged and replugged the mux block where the 4 channels were wired. She downloaded the FD data and cleared its memory. The wash reservoir was mostly full; she topped it off.

Daphne checked the picam clock and it was fast by 7 minutes. She changed both the system clock and hwclock from 9:14 to 9:07.

TC 1,9, and 21 have NANs and should be inspected further.

LI-7500 readings:
CO2 394ppm
H2O 630ppm
T 19.2C
P 101.4kPa
SS 101 --> 102 after cleaning
LI7700 readings:
CH4 1.9ppm
RSSI 47 --> 73 after cleaning

Carlos and I started at at the first coring location (closest to the tower site) and took 3 short cores using acrylic tubes (30 cm length, 7 cm diameter), 2 meters north, east and south of the long core coordinate location. See all coring locations in Hsm_core_logsheet here (https://berkeley.box.com/s/6aonkx9i9xj1s9fero3ig3lfri5od4hg).

Sara and Josh from the Fish and Wildlife Department came to the tower site to meet us and recommended to avoid driving into the site in the future to protect endangered mice. Since we had finished unloading the truck, we parked it at the entrance of the boardwalk.

Daphne Carlos and I went to location 2 and 3 and took 3 short cores at each site (N, E and S). We recorded coordinates, species present at the site, as well as soil compaction if observed.

At noon Scott Jones from USGS stopped by the tower to lend us two 1-meter long auger/peat corers of different diameter to collect the long soil cores.

We sampled long cores at locations hsm_1, hsm_2 and hsm_3 using the narrow diameter auger. Soils at these locations were very dry and top layers were unconsolidated. Bottom layers were clayey which prevented us from using the larger diameter auger (auger was getting stuck at depth and when twisting, metal started to bent). Compaction was observed and recorded using the narrow diameter auger. A short (~ 30 cm) soil core was taken immediately adjacent to the long core to have an intact/uncompacted sample of the upper 30 cm where most of the recent accumulation is likely recorded. Long cores were sliced in the field at 5 cm thick intervals. We used 5 ml syringes to subsample each layer, filling the syringe up to the 3 ml mark (~ width of the corer). We finished at location number 4, where we encountered problems using the narrow auger, compaction was about 50% and soils were wet and soft. We sampled the short cores, and postponed sampling the long coring at this site for the next day.

Short cores were labeled with the Ameriflux site name (Hsm), core location number (from 1 to 9), and cardinal direction (N, E or S). Long cores and immediately adjacent short cores were labelled using the Ameriflux name and location number followed by an L (e.g., Hsm_1_L).

We left at around 5:30 pm PDT.

10 photos found

Daphne and Carlos collecting a soil core with the narrow auger
20210707HS_auger.jpg ( 2021-07-07 14:32:22 ) Full size: 1920x1440
Daphne and Carlos collecting a soil core with the narrow auger

long core sampled with the wide open faced auger
20210708HS_hsm4.jpg ( 2021-07-08 08:41:24 ) Full size: 1440x1920
long core sampled with the wide open faced auger

Joe, Carlos, Daphne, and Ari with long core hsm_4
20210708HS_team.jpg ( 2021-07-08 08:41:24 ) Full size: 1440x1920
Joe, Carlos, Daphne, and Ari with long core hsm_4

long core sampled with the narrow open faced auger
20210708HS_hsm8.jpg ( 2021-07-08 13:23:00 ) Full size: 1440x1920
long core sampled with the narrow open faced auger

Carlos and Ari taking short (30cm) soil cores at Hill Slough. Carlos
20210707HS_CarlosAri.jpg ( 2021-07-07 16:26:18 ) Full size: 1920x1440
Carlos and Ari taking short (30cm) soil cores at Hill Slough. Carlos's shirt indicates how windy it is that day.

Carlos and Ari with a short soil core.
20210707HS_ShortSoilCore.jpg ( 2021-07-07 12:09:29 ) Full size: 1920x1440
Carlos and Ari with a short soil core.

Joe, Ari, Daphne, and Carlos taking soil core samples before levee breach and flooding
20210709HS_PrefloodSoilCoring.jpg ( 2021-07-09 00:00:00 ) Full size: 1920x1440
Joe, Ari, Daphne, and Carlos taking soil core samples before levee breach and flooding

Dennis, Joe, Ari, and Carlos taking soil core samples before levee breach/flooding. They are in a thick patch of lamb
20210709HS_SoilCoring.jpg ( 2021-07-08 10:45:58 ) Full size: 1920x1440
Dennis, Joe, Ari, and Carlos taking soil core samples before levee breach/flooding. They are in a thick patch of lamb's quarters (or similar plant).

Carlos, Ari, and Daphne sampling soils
HS_picam_20210707_1215.jpg ( 2021-07-07 12:15:05 ) Full size: 1917x1440
Carlos, Ari, and Daphne sampling soils

Ari and Carlos taking soil samples
HS_picam_20210707_0915.jpg ( 2021-07-07 09:15:05 ) Full size: 1917x1440
Ari and Carlos taking soil samples

Graphs display:
4 sets found

20 HS_met graphs found

Explore the graph:Temperatures in a new window

Explore the graph:Temperature Profile A in a new window

Explore the graph:Temperature Profile B in a new window

Explore the graph:Temperature Profile C in a new window

Explore the graph:Soil Heat Flux in a new window

Explore the graph:Four-channel radiometer in a new window

Explore the graph:NDVI Channels in a new window

Explore the graph:PAR in a new window

Explore the graph:Air Pressure in a new window

Explore the graph:Air T and RH in a new window

Explore the graph:pCO2 in a new window

Explore the graph:Soil Moisture in a new window

Explore the graph:Battery Voltage in a new window

Explore the graph:Forced Diffusion Soil CO2 Flux in a new window

Explore the graph:Dissolved Oxygen in a new window

Explore the graph:Water Level in a new window

Explore the graph:Conductivity in a new window

Explore the graph:EXO pH + ORP in a new window

Explore the graph:EXO Turbidity + fDOM in a new window

Explore the graph:Water Temp in a new window

4 HS_flux graphs found

Explore the graph:CO2 and H2O in a new window

Explore the graph:Wind in a new window

Explore the graph:Methane in a new window

Explore the graph:Data Counts in a new window

1 HS_cam graphs found

Explore the graph:GCC in a new window

Can't check HS_Processed
2 HS_Processed graphs found

Explore the graph:Energy in a new window

Explore the graph:CO2, CH4 Net Fluxes in a new window